--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/_build/html/netcdf_file.html Thu Mar 15 10:46:04 2012 +0100
@@ -0,0 +1,1352 @@
+
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+
+
+<html xmlns="http://www.w3.org/1999/xhtml">
+ <head>
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+
+ <title>The SCC netCDF file format — Single Calculus Chain 0.2 documentation</title>
+
+ <link rel="stylesheet" href="_static/nature.css" type="text/css" />
+ <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+
+ <script type="text/javascript">
+ var DOCUMENTATION_OPTIONS = {
+ URL_ROOT: '',
+ VERSION: '0.2',
+ COLLAPSE_INDEX: false,
+ FILE_SUFFIX: '.html',
+ HAS_SOURCE: true
+ };
+ </script>
+ <script type="text/javascript" src="_static/jquery.js"></script>
+ <script type="text/javascript" src="_static/underscore.js"></script>
+ <script type="text/javascript" src="_static/doctools.js"></script>
+ <script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
+ <link rel="top" title="Single Calculus Chain 0.2 documentation" href="index.html" />
+ <link rel="next" title="User management" href="user_managment.html" />
+ <link rel="prev" title="Processing measurement" href="measurement_upload.html" />
+ </head>
+ <body>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ accesskey="I">index</a></li>
+ <li class="right" >
+ <a href="user_managment.html" title="User management"
+ accesskey="N">next</a> |</li>
+ <li class="right" >
+ <a href="measurement_upload.html" title="Processing measurement"
+ accesskey="P">previous</a> |</li>
+ <li><a href="index.html">Single Calculus Chain 0.2 documentation</a> »</li>
+ </ul>
+ </div>
+
+ <div class="document">
+ <div class="documentwrapper">
+ <div class="bodywrapper">
+ <div class="body">
+
+ <div class="section" id="the-scc-netcdf-file-format">
+<h1>The SCC netCDF file format<a class="headerlink" href="#the-scc-netcdf-file-format" title="Permalink to this headline">¶</a></h1>
+<div class="section" id="rationale">
+<h2>Rationale<a class="headerlink" href="#rationale" title="Permalink to this headline">¶</a></h2>
+<p>The Single Calculus Chain (SCC) is composed by two different modules:</p>
+<ul class="simple">
+<li>pre-processing module ( scc_preprocessing)</li>
+<li>optical processing module ( ELDA)</li>
+</ul>
+<p>To perfom aerosol optical retrievals the SCC needs not only the raw
+lidar data but also a certain number of parameters to use in both
+pre-processing and optical processing stages. The SCC gets these
+parameters looking at two different locations:</p>
+<ul class="simple">
+<li>Single Calculus Chain relational database (SCC_DB)</li>
+<li>Input files</li>
+</ul>
+<p>There are some paramenters that can be found only in the input files
+(those ones changing from measurement to measurement), others that can
+be found only in the SCC_DB and other ones that can be found in both
+these locations. In the last case, if a particular parameter is needed,
+the SCC will search first in the input files and then in SCC_DB. If the
+parameter is found in the input files the SCC will keep it without
+looking into SCC_DB.</p>
+<p>The input files have to be submitted to the SCC in NetCDF format. At the
+present the SCC can handle four different types of input files:</p>
+<ol class="arabic simple">
+<li>Raw Lidar Data</li>
+<li>Sounding Data</li>
+<li>Overlap</li>
+<li>Lidar Ratio</li>
+</ol>
+<p>As already mentioned, the Raw Lidar Data file contains not only the
+raw lidar data but also other parameters to use to perform the
+pre-processing and optical processing. The Sounding Data file
+contains the data coming from a correlative radiosounding and it is used
+by the SCC for molecular density calculation. The Overlap file
+contains the measured overlap function. The Lidar Ratio file contains
+a lidar ratio profile to use in elastic backscatter retrievals. The
+Raw Lidar Data file is of course mandatory and the Sounding Data,
+Overlap and Lidar Ratio files are optional. If Sounding Data file
+is not submitted by the user, the molecular density will be calculated
+by the SCC using the “US Standard Atmosphere 1976”. If the Overlap
+file is not submitted by the user, the SCC will get the full overlap
+height from SCC_DB and it will produce optical results starting from
+this height. If Lidar Ratio file is not submitted by the user, the
+SCC will consider a fixed value for lidar ratio got from SCC_DB.</p>
+<p>The user can decide to submit all these files or any number of them (of
+course the file Raw Lidar Data is mandatory). For example the user
+can submit together with the Raw Lidar Data file only the Sounding
+Data file or only the Overlap file.</p>
+<p>This document provides a detailed explanation about the structure of the
+NetCDF input files to use for SCC data submission. All Earlinet groups
+should read it carefully because they have to produce such kind of input
+files if they want to use the SCC for their standard lidar retrievals.
+Every comments or suggestions regarding this document can be sent to
+Giuseppe D’Amico by e-mail at <tt class="docutils literal"><span class="pre">damico@imaa.cnr.it</span></tt></p>
+<p>This document is available for downloading at <tt class="docutils literal"><span class="pre">www.earlinetasos.org</span></tt></p>
+<p>In table tab:rawdata is reported a list of dimensions, variables and
+global attributes that can be used in the NetCDF Raw Lidar Data input
+file. For each of them it is indicated:</p>
+<ul class="simple">
+<li>The name. For the multidimensional variables also the corresponding
+dimensions are reported</li>
+<li>A description explaining the meaning</li>
+<li>The type</li>
+<li>If it is mandatory or optional</li>
+</ul>
+<p>As already mentioned, the SCC can get some parameters looking first in
+the Raw Lidar Data input file and then into SCC_DB. This means that
+to use the parameters stored in SCC_DB the optional variables or
+optional global attributes must not appear within Raw Lidar Data
+file. This is the suggested and recommended way to use the SCC. Please
+include optional parameters in the Raw Lidar Data only as an
+exception.</p>
+<p>In table tab:sounding, tab:overlap and tab:lr are reported all the
+information about the structure of Sounding Data, Overlap and
+Lidar Ratio input files respectively.</p>
+</div>
+<div class="section" id="example">
+<h2>Example<a class="headerlink" href="#example" title="Permalink to this headline">¶</a></h2>
+<p>Let’s now consider an example of Raw Lidar Data input file. Suppose
+we want to generate NetCDF input file corresponding to a measurement
+with the following properties:</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="34%" />
+<col width="66%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td>Start Date</td>
+<td><span class="math">\(30^{th}\)</span> January 2009</td>
+</tr>
+<tr class="row-even"><td>Start Time UT</td>
+<td>00:00:01</td>
+</tr>
+<tr class="row-odd"><td>Stop Time UT</td>
+<td>00:05:01</td>
+</tr>
+<tr class="row-even"><td>Station Name</td>
+<td>Dummy station</td>
+</tr>
+<tr class="row-odd"><td>Earlinet call-sign</td>
+<td>cc</td>
+</tr>
+<tr class="row-even"><td>Pointing angle</td>
+<td>5 degrees with respect to the zenith</td>
+</tr>
+</tbody>
+</table>
+<p>Moreover suppose that this measurement is composed by the following
+lidar channels:</p>
+<ol class="arabic">
+<li><p class="first">1064 lidar channel</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="49%" />
+<col width="51%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td><p class="first last">Emission wavelength=1064nm</p>
+</td>
+<td><p class="first last">Detection wavelength=1064nm</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Time resolution=30s</p>
+</td>
+<td><p class="first last">Number of laser shots=1500</p>
+</td>
+</tr>
+<tr class="row-odd"><td><p class="first last">Number of bins=3000</p>
+</td>
+<td><p class="first last">Detection mode=analog</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Range resolution=7.5m</p>
+</td>
+<td><p class="first last">Polarization state=total</p>
+</td>
+</tr>
+</tbody>
+</table>
+</li>
+<li><p class="first">532 cross lidar channel</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="47%" />
+<col width="53%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td><p class="first last">Emission wavelength=532nm</p>
+</td>
+<td><p class="first last">Detection wavelength=532nm</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Time resolution=60s</p>
+</td>
+<td><p class="first last">Number of laser shots=3000</p>
+</td>
+</tr>
+<tr class="row-odd"><td><p class="first last">Number of bins=5000</p>
+</td>
+<td><p class="first last">Detection mode=photoncounting</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Range resolution=15m</p>
+</td>
+<td><p class="first last">Polarization state=cross</p>
+</td>
+</tr>
+</tbody>
+</table>
+</li>
+<li><p class="first">532 parallel lidar channel</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="47%" />
+<col width="53%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td><p class="first last">Emission wavelength=532nm</p>
+</td>
+<td><p class="first last">Detection wavelength=532nm</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Time resolution=60s</p>
+</td>
+<td><p class="first last">Number of laser shots=3000</p>
+</td>
+</tr>
+<tr class="row-odd"><td><p class="first last">Number of bins=5000</p>
+</td>
+<td><p class="first last">Detection mode=photoncounting</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Range resolution=15m</p>
+</td>
+<td><p class="first last">Polarization state=parallel</p>
+</td>
+</tr>
+</tbody>
+</table>
+</li>
+<li><p class="first">607 <span class="math">\(N_2\)</span> vibrational Raman channel</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="47%" />
+<col width="53%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td><p class="first last">Emission wavelength=532nm</p>
+</td>
+<td><p class="first last">Detection wavelength=607nm</p>
+</td>
+</tr>
+<tr class="row-even"><td><p class="first last">Time resolution=60s</p>
+</td>
+<td><p class="first last">Number of laser shots=3000</p>
+</td>
+</tr>
+<tr class="row-odd"><td><p class="first last">Number of bins=5000</p>
+</td>
+<td><p class="first last">Detection mode=photoncounting</p>
+</td>
+</tr>
+<tr class="row-even"><td colspan="2"><p class="first last">Range resolution=15m</p>
+</td>
+</tr>
+</tbody>
+</table>
+</li>
+</ol>
+<p>Finally let’s assume we have also performed dark measurements before the
+lidar measurements from the 23:50:01 UT up to 23:53:01 UT of
+29:math:<cite>^mathrmth</cite> January 2009.</p>
+<div class="section" id="dimensions">
+<h3>Dimensions<a class="headerlink" href="#dimensions" title="Permalink to this headline">¶</a></h3>
+<p>Looking at table tab:rawdata we have to fix the following dimensions:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">points</span>
+<span class="n">channels</span>
+<span class="n">time</span>
+<span class="n">nb_of_time_scales</span>
+<span class="n">scan_angles</span>
+<span class="n">time_bck</span>
+</pre></div>
+</div>
+<p>The dimension <tt class="docutils literal"><span class="pre">time</span></tt> is unlimited so we don’t have to fix it.</p>
+<p>We have 4 lidar channels so:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">channels</span><span class="o">=</span><span class="mi">4</span>
+</pre></div>
+</div>
+<p>Regarding the dimension <tt class="docutils literal"><span class="pre">points</span></tt> we have only one channel with a
+number of vertical bins equal to 3000 (the 1064nm) and all other
+channels with 5000 vertical bins. In cases like this the dimension
+<tt class="docutils literal"><span class="pre">points</span></tt> has to be fixed to the maximum number of vertical bins so:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">points</span><span class="o">=</span><span class="mi">5000</span>
+</pre></div>
+</div>
+<p>Moreover only one channel (1064nm) is acquired with a time resolution of
+30 seconds, all the other channels have a time resolution of 60 seconds.
+This means that we have to define two different time scales. We have to
+set:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">nb_of_time_scales</span><span class="o">=</span><span class="mi">2</span>
+</pre></div>
+</div>
+<p>The measurement is performed only at one scan angle (5 degrees with
+respect to the zenith) so:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">scan_angles</span><span class="o">=</span><span class="mi">1</span>
+</pre></div>
+</div>
+<p>We have 3 minutes of dark measurements and two different time scales one
+with 60 seconds time resolution and the other one with 30 seconds time
+resolution. So we will have 3 different dark profiles for the channels
+acquired with the first time scale and 6 for the lidar channels acquired
+with the second time scale. We have to fix the dimension <tt class="docutils literal"><span class="pre">time_bck</span></tt> as
+the maximum between these values:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">time_bck</span><span class="o">=</span><span class="mi">6</span>
+</pre></div>
+</div>
+</div>
+<div class="section" id="variables">
+<h3>Variables<a class="headerlink" href="#variables" title="Permalink to this headline">¶</a></h3>
+<p>In this section it will be explained how to fill all the possible
+variables either mandatory or optional of Raw Lidar Data input file.</p>
+<dl class="docutils">
+<dt>Raw_Data_Start_Time(time, nb_of_time_scales)</dt>
+<dd><p class="first">This 2 dimensional mandatory array has to contain the acquisition
+start time (in seconds from the time given by the global attribute
+<tt class="docutils literal"><span class="pre">RawData_Start_Time_UT</span></tt>) of each lidar profile. In this example we
+have two different time scales: one is characterized by steps of 30
+seconds (the 1064nm is acquired with this time scale) the other by
+steps of 60 seconds (532cross, 532parallel and 607nm). Moreover the
+measurement start time is 00:00:01 UT and the measurement stop time
+is 00:05:01 UT. In this case we have to define:</p>
+<div class="highlight-python"><pre>Raw_Data_Start_Time =
+ 0, 0,
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ 240, 120,
+ _, 150,
+ _, 180,
+ _, 210,
+ _, 240,
+ _, 270 ;</pre>
+</div>
+<p class="last">The order used to fill this array defines the correspondence between
+the different time scales and the time scale index. In this example
+we have a time scale index of 0 for the time scale with steps of 60
+seconds and a time scale index of 1 for the other one.</p>
+</dd>
+<dt>Raw_Data_Stop_Time(time, nb_of_time_scales)</dt>
+<dd><p class="first">The same as previous item but for the data acquisition stop time.
+Following a similar procedure we have to define:</p>
+<div class="last highlight-python"><pre>Raw_Data_Stop_Time =
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ 240, 120,
+ 300, 150,
+ _, 180,
+ _, 210,
+ _, 240,
+ _, 270,
+ _, 300 ;</pre>
+</div>
+</dd>
+<dt>Raw_Lidar_Data(time, channels, points)</dt>
+<dd><p class="first">This 3 dimensional mandatory array has to be filled with the
+time-series of raw lidar data. The photoncounting profiles have to
+submitted in counts (so as integers) while the analog ones in mV. The
+order the user chooses to fill this array defines the correspondence
+between channel index and lidar data.</p>
+<p>For example if we fill this array in such way that:</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="38%" />
+<col width="62%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td>Raw_Lidar_Data(time,0,points</td>
+<td><span class="math">\(\rightarrow\)</span> is the time-series of 1064 nm</td>
+</tr>
+<tr class="row-even"><td>Raw_Lidar_Data(time,1,points</td>
+<td><span class="math">\(\rightarrow\)</span> is the time-series of 532 cross</td>
+</tr>
+<tr class="row-odd"><td>Raw_Lidar_Data(time,2,points</td>
+<td><span class="math">\(\rightarrow\)</span> is the time-series of 532 parallel</td>
+</tr>
+<tr class="row-even"><td>Raw_Lidar_Data(time,3,points</td>
+<td><span class="math">\(\rightarrow\)</span> is the time-series of 607 nm</td>
+</tr>
+</tbody>
+</table>
+<p class="last">from now on the channel index 0 is associated to the 1064 channel,
+1 to the 532 cross, 2 to the 532 parallel and 3 to the 607nm.</p>
+</dd>
+<dt>Raw_Bck_Start_Time(time_bck, nb_of_time_scales)</dt>
+<dd><p class="first">This 2 dimensional optional array has to contain the acquisition
+start time (in seconds from the time given by the global attribute
+<tt class="docutils literal"><span class="pre">RawBck_Start_Time_UT</span></tt>) of each dark measurements profile.
+Following the same procedure used for the variable
+<tt class="docutils literal"><span class="pre">Raw_Data_Start_Time</span></tt> we have to define:</p>
+<div class="last highlight-python"><pre>Raw_Bck_Start_Time =
+ 0, 0,
+ 60, 30,
+ 120, 60,
+ _, 90,
+ _, 120,
+ _, 150;</pre>
+</div>
+</dd>
+<dt>Raw_Bck_Stop_Time(time_bck, nb_of_time_scales)</dt>
+<dd><p class="first">The same as previous item but for the dark acquisition stop time.
+Following a similar procedure we have to define:</p>
+<div class="last highlight-python"><pre>Raw_Bck_Stop_Time =
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ _, 120,
+ _, 150,
+ _, 180 ;</pre>
+</div>
+</dd>
+<dt>Background_Profile(time_bck, channels, points)</dt>
+<dd><p class="first">This 3 dimensional optional array has to be filled with the
+time-series of the dark measurements data. The photoncounting
+profiles have to submitted in counts (so as integers) while the
+analog ones in mV. The user has to fill this array following the same
+order used in filling the array <tt class="docutils literal"><span class="pre">Raw_Lidar_Data</span></tt>:</p>
+<table border="1" class="last docutils">
+<colgroup>
+<col width="44%" />
+<col width="56%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td>Background_Profile(time_bck,0,points</td>
+<td><span class="math">\(\rightarrow\)</span> dark time-series at 1064 nm</td>
+</tr>
+<tr class="row-even"><td>Background_Profile(time_bck,1,points</td>
+<td><span class="math">\(\rightarrow\)</span> dark time-series at 532 cross</td>
+</tr>
+<tr class="row-odd"><td>Background_Profile(time_bck,2,points</td>
+<td><span class="math">\(\rightarrow\)</span> dark time-series at 532 parallel</td>
+</tr>
+<tr class="row-even"><td>Background_Profile(time_bck,3,points</td>
+<td><span class="math">\(\rightarrow\)</span> dark time-series at 607 nm</td>
+</tr>
+</tbody>
+</table>
+</dd>
+<dt>channel_ID(channels)</dt>
+<dd><p class="first">This mandatory array provides the link between the channel index
+within the Raw Lidar Data input file and the channel ID in
+SCC_DB. To fill this variable the user has to know which channel IDs
+in SCC_DB correspond to his lidar channels. For this purpose the
+SCC, in its final version will provide to the user a special tool to
+get these channel IDs through a Web interface. At the moment this
+interface is not yet available and these channel IDs will be
+communicated directly to the user by the NA5 people.</p>
+<p>Anyway to continue the example let’s suppose that the four lidar
+channels taken into account are mapped into SCC_DB with the
+following channel IDs:</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="30%" />
+<col width="70%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td>1064 nm</td>
+<td><span class="math">\(\rightarrow\)</span> channel ID=7</td>
+</tr>
+<tr class="row-even"><td>532 cross</td>
+<td><span class="math">\(\rightarrow\)</span> channel ID=5</td>
+</tr>
+<tr class="row-odd"><td>532 parallel</td>
+<td><span class="math">\(\rightarrow\)</span> channel ID=6</td>
+</tr>
+<tr class="row-even"><td>607 nm</td>
+<td><span class="math">\(\rightarrow\)</span> channel ID=8</td>
+</tr>
+</tbody>
+</table>
+<blockquote>
+<div>In this case we have to define:</div></blockquote>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">channel_ID</span> <span class="o">=</span> <span class="mi">7</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">,</span> <span class="mi">8</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>id_timescale(channels)</dt>
+<dd><p class="first">This mandatory array is introduced to determine which time scale is
+used for the acquisition of each lidar channel. In particular this
+array defines the link between the channel index and the time scale
+index. In our example we have two different time scales. Filling the
+arrays <tt class="docutils literal"><span class="pre">Raw_Data_Start_Time</span></tt> and <tt class="docutils literal"><span class="pre">Raw_Data_Stop_Time</span></tt> we have
+defined a time scale index of 0 for the time scale with steps of 60
+seconds and a time scale index of 1 for the other one with steps of
+30 seconds. In this way this array has to be set as:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">id_timescale</span> <span class="o">=</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">0</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Laser_Pointing_Angle(scan_angles</dt>
+<dd><p class="first">This mandatory array contains all the scan angles used in the
+measurement. In our example we have only one scan angle of 5 degrees
+with respect to the zenith, so we have to define:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Laser_Pointing_Angle</span> <span class="o">=</span> <span class="mi">5</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Laser_Pointing_Angle_of_Profiles(time, nb_of_time_scales)</dt>
+<dd><p class="first">This mandatory array is introduced to determine which scan angle is
+used for the acquisition of each lidar profile. In particular this
+array defines the link between the time and time scales indexes and
+the scan angle index. In our example we have a single scan angle that
+has to correspond to the scan angle index 0. So this array has to be
+defined as:</p>
+<div class="last highlight-python"><pre>Laser_Pointing_Angle_of_Profiles =
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ _, 0,
+ _, 0,
+ _, 0,
+ _, 0,
+ _, 0 ;</pre>
+</div>
+</dd>
+<dt>Laser_Shots(time, channels)</dt>
+<dd><p class="first">This mandatory array stores the laser shots accumulated at each time
+for each channel. In our example the number of laser shots
+accumulated is 1500 for the 1064nm channels and 3000 for all the
+other channels. Moreover the laser shots do not change with the time.
+So we have to define this array as:</p>
+<div class="last highlight-python"><pre>Laser_Shots =
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _ ;</pre>
+</div>
+</dd>
+<dt>Emitted_Wavelength(channels)</dt>
+<dd><p class="first">This optional array defines the link between the channel index and
+the emission wavelength for each lidar channel. The wavelength has to
+be expressed in nm. This information can be also taken from SCC_DB.
+In our example we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Emitted_Wavelength</span> <span class="o">=</span> <span class="mi">1064</span><span class="p">,</span> <span class="mi">532</span><span class="p">,</span> <span class="mi">532</span><span class="p">,</span> <span class="mi">532</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Detected_Wavelength(channels)</dt>
+<dd><p class="first">This optional array defines the link between the channel index and
+the detected wavelength for each lidar channel. Here detected
+wavelength means the value of center of interferential filter
+expressed in nm. This information can be also taken from SCC_DB. In
+our example we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Detected_Wavelength</span> <span class="o">=</span> <span class="mi">1064</span><span class="p">,</span> <span class="mi">532</span><span class="p">,</span> <span class="mi">532</span><span class="p">,</span> <span class="mi">607</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Raw_Data_Range_Resolution(channels)</dt>
+<dd><p class="first">This optional array defines the link between the channel index and
+the raw range resolution for each channel. If the scan angle is
+different from zero this quantity is different from the vertical
+resolution. More precisely if <span class="math">\(\alpha\)</span> is the scan angle used
+and <span class="math">\(\Delta z\)</span> is the range resolution the vertical
+resolution is calculated as <span class="math">\(\Delta
+z'=\Delta z \cos\alpha\)</span>. This array has to be filled with
+<span class="math">\(\Delta z\)</span> and not with <span class="math">\(\Delta z'\)</span>. The unit is
+meters. This information can be also taken from SCC_DB. In our
+example we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Raw_Data_Range_Resolution</span> <span class="o">=</span> <span class="mf">7.5</span><span class="p">,</span> <span class="mf">15.0</span><span class="p">,</span> <span class="mf">15.0</span><span class="p">,</span> <span class="mf">15.0</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>ID_Range(channels)</dt>
+<dd><p class="first">This optional array defines if a particular channel is configured as
+high, low or ultranear range channel. In particular a value 0
+indicates a low range channel, a value 1 a high range channel and a
+value of 2 an ultranear range channel. If for a particular channel
+you don’t separate between high and low range channel, please set the
+corresponding value to 1. This information can be also taken from
+SCC_DB. In our case we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">ID_Range</span> <span class="o">=</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Scattering_Mechanism(channels)</dt>
+<dd><p class="first">This optional array defines the scattering mechanism involved in
+each lidar channel. In particular the following values are adopted:</p>
+<table border="1" class="docutils">
+<colgroup>
+<col width="6%" />
+<col width="94%" />
+</colgroup>
+<tbody valign="top">
+<tr class="row-odd"><td>0</td>
+<td><span class="math">\(\rightarrow\)</span> Total elastic backscatter</td>
+</tr>
+<tr class="row-even"><td>1</td>
+<td><span class="math">\(\rightarrow\)</span> <span class="math">\(N_2\)</span> vibrational Raman backscatter</td>
+</tr>
+<tr class="row-odd"><td>2</td>
+<td><span class="math">\(\rightarrow\)</span> Cross polarization elastic backscatter</td>
+</tr>
+<tr class="row-even"><td>3</td>
+<td><span class="math">\(\rightarrow\)</span> Parallel polarization elastic backscatter</td>
+</tr>
+<tr class="row-odd"><td>4</td>
+<td><span class="math">\(\rightarrow\)</span> <span class="math">\(H_2O\)</span> vibrational Raman backscatter</td>
+</tr>
+<tr class="row-even"><td>5</td>
+<td><span class="math">\(\rightarrow\)</span> Rotational Raman Stokes line close to elastic line</td>
+</tr>
+<tr class="row-odd"><td>6</td>
+<td><span class="math">\(\rightarrow\)</span> Rotational Raman Stokes line far from elastic line</td>
+</tr>
+<tr class="row-even"><td>7</td>
+<td><span class="math">\(\rightarrow\)</span> Rotational Raman anti-Stokes line close to elastic line</td>
+</tr>
+<tr class="row-odd"><td>8</td>
+<td><span class="math">\(\rightarrow\)</span> Rotational Raman anti-Stokes line far from elastic line</td>
+</tr>
+<tr class="row-even"><td>9</td>
+<td><span class="math">\(\rightarrow\)</span> Rotational Raman Stokes and anti-Stokes lines close to elastic line</td>
+</tr>
+<tr class="row-odd"><td>10</td>
+<td><span class="math">\(\rightarrow\)</span> Rotational Raman Stokes and anti-Stokes lines far from elastic line</td>
+</tr>
+</tbody>
+</table>
+<p>This information can be also taken from SCC_DB. In our example we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Scattering_Mechanism</span> <span class="o">=</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">,</span> <span class="mi">1</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Acquisition_Mode(channels)</dt>
+<dd><p class="first">This optional array defines the acquisition mode (analog or
+photoncounting) involved in each lidar channel. In particular a value
+of 0 means analog mode and 1 photoncounting mode. This information
+can be also taken from SCC_DB. In our example we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Acquisition_Mode</span> <span class="o">=</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Laser_Repetition_Rate(channels)</dt>
+<dd><p class="first">This optional array defines the repetition rate in Hz used to
+acquire each lidar channel. This information can be also taken from
+SCC_DB. In our example we are supposing we have only one laser with
+a repetition rate of 50 Hz so we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Laser_Repetition_Rate</span> <span class="o">=</span> <span class="mi">50</span><span class="p">,</span> <span class="mi">50</span><span class="p">,</span> <span class="mi">50</span><span class="p">,</span> <span class="mi">50</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Dead_Time(channels)</dt>
+<dd><p class="first">This optional array defines the dead time in ns associated to each
+lidar channel. The SCC will use the values given by this array to
+correct the photoncounting signals for dead time. Of course for
+analog signals no dead time correction will be applied (for analog
+channels the corresponding dead time values have to be set to
+undefined value). This information can be also taken from SCC_DB. In
+our example the 1064 nm channel is acquired in analog mode so the
+corresponding dead time value has to be undefined. If we suppose a
+dead time of 10 ns for all other channels we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Dead_Time</span> <span class="o">=</span> <span class="n">_</span><span class="p">,</span> <span class="mi">10</span><span class="p">,</span> <span class="mi">10</span><span class="p">,</span> <span class="mi">10</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Dead_Time_Corr_Type(channels</dt>
+<dd><p class="first">This optional array defines which kind of dead time correction has
+to be applied on each photoncounting channel. The SCC will correct
+the data supposing a not-paralyzable channel if a value of 0 is found
+while a paralyzable channel is supposed if a value of 1 is found. Of
+course for analog signals no dead time correction will be applied and
+so the corresponding values have to be set to undefined value. This
+information can be also taken from SCC_DB. In our example the 1064
+nm channel is acquired in analog mode so the corresponding has to be
+undefined. If we want to consider all the photoncounting signals as
+not-paralyzable ones: we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Dead_Time_Corr_Type</span> <span class="o">=</span> <span class="n">_</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">0</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Trigger_Delay(channels)</dt>
+<dd><p class="first">This optional array defines the delay (in ns) of the middle of the
+first rangebin with respect to the output laser pulse for each lidar
+channel. The SCC will use the values given by this array to correct
+for trigger delay. This information can be also taken from SCC_DB.
+Let’s suppose that in our example all the photoncounting channels are
+not affected by this delay and only the analog channel at 1064nm is
+acquired with a delay of 50ns. In this case we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Trigger_Delay</span> <span class="o">=</span> <span class="mi">50</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">0</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Background_Mode(channels</dt>
+<dd><p class="first">This optional array defines how the atmospheric background has to be
+subtracted from the lidar channel. Two options are available for the
+calculation of atmospheric background:</p>
+<ol class="arabic simple">
+<li>Average in the far field of lidar channel. In this case the value
+of this variable has to be 1</li>
+<li>Average within pre-trigger bins. In this case the value of this
+variable has to be 0</li>
+</ol>
+<p>This information can be also taken from SCC_DB. Let’s suppose in our
+example we use the pre-trigger for the 1064nm channel and the far
+field for all other channels. In this case we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Background_Mode</span> <span class="o">=</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span><span class="p">,</span> <span class="mi">1</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Background_Low(channels)</dt>
+<dd><p class="first">This mandatory array defines the minimum altitude (in meters) to
+consider in calculating the atmospheric background for each channel.
+In case pre-trigger mode is used the corresponding value has to be
+set to the rangebin to be used as lower limit (within pre-trigger
+region) for background calculation. In our example, if we want to
+calculate the background between 30000 and 50000 meters for all
+photoncounting channels and we want to use the first 500 pre-trigger
+bins for the background calculation for the 1064nm channel we have to
+set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Background_Low</span><span class="o">=</span> <span class="mi">0</span><span class="p">,</span> <span class="mi">30000</span><span class="p">,</span> <span class="mi">30000</span><span class="p">,</span> <span class="mi">30000</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Background_High(channels)</dt>
+<dd><p class="first">This mandatory array defines the maximum altitude (in meters) to
+consider in calculating the atmospheric background for each channel.
+In case pre-trigger mode is used the corresponding value has to be
+set to the rangebin to be used as upper limit (within pre-trigger
+region) for background calculation. In our example, if we want to
+calculate the background between 30000 and 50000 meters for all
+photoncounting channels and we want to use the first 500 pre-trigger
+bins for the background calculation for the 1064nm channel we have to
+set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Background_High</span> <span class="o">=</span> <span class="mi">500</span><span class="p">,</span> <span class="mi">50000</span><span class="p">,</span> <span class="mi">50000</span><span class="p">,</span> <span class="mi">50000</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Molecular_Calc</dt>
+<dd><p class="first">This mandatory variable defines the way used by SCC to calculate the
+molecular density profile. At the moment two options are available:</p>
+<ol class="arabic simple">
+<li>US Standard Atmosphere 1976. In this case the value of this
+variable has to be 0</li>
+<li>Radiosounding. In this case the value of this variable has to be 1</li>
+</ol>
+<p>If we decide to use the option 1. we have to provide also the
+measured pressure and temperature at lidar station level. Indeed if
+we decide to use the option 2. a radiosounding file has to be
+submitted separately in NetCDF format (the structure of this file is
+summarized in table tab:sounding). Let’s suppose we want to use the
+option 1. so:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Molecular_Calc</span> <span class="o">=</span> <span class="mi">0</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Pressure_at_Lidar_Station</dt>
+<dd><p class="first">Because we have chosen the US Standard Atmosphere for calculation of
+the molecular density profile we have to give the pressure in hPa at
+lidar station level:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Pressure_at_Lidar_Station</span> <span class="o">=</span> <span class="mi">1010</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Temperature_at_Lidar_Station</dt>
+<dd><p class="first">Because we have chosen the US Standard Atmosphere for calculation of
+the molecular density profile we have to give the temperature in C at
+lidar station level:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Temperature_at_Lidar_Station</span> <span class="o">=</span> <span class="mf">19.8</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>Depolarization_Factor(channels)</dt>
+<dd><p class="first">This array is required only for lidar systems that use the two
+depolarization channels for the backscatter retrieval. It represents
+the factor <span class="math">\(f\)</span> to calculate the total backscatter signal
+<span class="math">\(S_t\)</span> combining its cross <span class="math">\(S_c\)</span> and parallel
+<span class="math">\(S_p\)</span> components: <span class="math">\(S_t=S_p+fS_c\)</span>. This factor is
+mandatory only for systems acquiring <span class="math">\(S_c\)</span> and <span class="math">\(S_p\)</span>
+and not <span class="math">\(S_t\)</span>. For systems acquiring <span class="math">\(S_c\)</span>,
+<span class="math">\(S_p\)</span> and <span class="math">\(S_t\)</span> this factor is optional and it will
+be used only for depolarizaton ratio calculation. Moreover only the
+values of the array corresponding to cross polarization channels will
+be considered; all other values will be not taken into account and
+should be set to undefined value. In our example for the wavelength
+532nm we have only the cross and the parallel components and not the
+total one. So we have to give the value of this factor only in
+correspondence of the 532nm cross polarization channel that
+corresponds to the channel index 1. Suppose that this factor is 0.88.
+Moreover, because we don’t have any other depolarization channels we
+have also to set all other values of the array to undefined value.</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Depolarization_Factor</span> <span class="o">=</span> <span class="n">_</span><span class="p">,</span><span class="mf">0.88</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>LR_Input(channels)</dt>
+<dd><p class="first">This array is required only for lidar channels for which elastic
+backscatter retrieval has to be performed. It defines the lidar ratio
+to be used within this retrieval. Two options are available:</p>
+<ol class="arabic simple">
+<li>The user can submit a lidar ratio profile. In this case the value
+of this variable has to be 0.</li>
+<li>A fixed value of lidar ratio can be used. In this case the value
+of this variable has to be 1.</li>
+</ol>
+<p>If we decide to use the option 1. a lidar ratio file has to be
+submitted separately in NetCDF format (the structure of this file is
+summarized in table tab:lr). If we decide to use the option 2. the
+fixed value of lidar ratio will be taken from SCC_DB. In our example
+we have to give a value of this array only for the 1064nm lidar
+channel because for the 532nm we will be able to retrieve a Raman
+backscatter coefficient. In case we want to use the fixed value
+stored in SCC_DB we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">LR_Input</span> <span class="o">=</span> <span class="mi">1</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>DAQ_Range(channels)</dt>
+<dd><p class="first">This array is required only if one or more lidar signals are
+acquired in analog mode. It gives the analog scale in mV used to
+acquire the analog signals. In our example we have only the 1064nm
+channel acquired in analog mode. If we have used a 100mV analog scale
+to acquire this channel we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">DAQ_Range</span> <span class="o">=</span> <span class="mi">100</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+</dl>
+</div>
+<div class="section" id="global-attributes">
+<h3>Global attributes<a class="headerlink" href="#global-attributes" title="Permalink to this headline">¶</a></h3>
+<dl class="docutils">
+<dt>Measurement_ID</dt>
+<dd><p class="first">This mandatory global attribute defines the measurement ID
+corresponding to the actual lidar measurement. It is a string
+composed by 12 characters. The first 8 characters give the start date
+of measurement in the format YYYYMMDD. The next 2 characters give the
+Earlinet call-sign of the station. The last 2 characters are used to
+distinguish between different time-series within the same date. In
+our example we have to set:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">Measurement_ID</span><span class="o">=</span> <span class="s">"20090130cc00"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>RawData_Start_Date</dt>
+<dd><p class="first">This mandatory global attribute defines the start date of lidar
+measurements in the format YYYYMMDD. In our case we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">RawData_Start_Date</span> <span class="o">=</span> <span class="s">"20090130"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>RawData_Start_Time_UT</dt>
+<dd><p class="first">This mandatory global attribute defines the UT start time of lidar
+measurements in the format HHMMSS. In our case we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">RawData_Start_Time_UT</span> <span class="o">=</span> <span class="s">"000001"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>RawData_Stop_Time_UT``</dt>
+<dd><p class="first">This mandatory global attribute defines the UT stop time of lidar
+measurements in the format HHMMSS. In our case we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">RawData_Stop_Time_UT</span> <span class="o">=</span> <span class="s">"000501"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>RawBck_Start_Date</dt>
+<dd><p class="first">This optional global attribute defines the start date of dark
+measurements in the format YYYYMMDD. In our case we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">RawBck_Start_Date</span> <span class="o">=</span> <span class="s">"20090129"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>RawBck_Start_Time_UT</dt>
+<dd><p class="first">This optional global attribute defines the UT start time of dark
+measurements in the format HHMMSS. In our case we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">RawBck_Start_Time_UT</span> <span class="o">=</span> <span class="s">"235001"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+<dt>RawBck_Stop_Time_UT</dt>
+<dd><p class="first">This optional global attribute defines the UT stop time of dark
+measurements in the format HHMMSS. In our case we have:</p>
+<div class="last highlight-python"><div class="highlight"><pre><span class="n">RawBck_Stop_Time_UT</span> <span class="o">=</span> <span class="s">"235301"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</dd>
+</dl>
+</div>
+</div>
+<div class="section" id="example-of-file-cdl-format">
+<h2>Example of file (CDL format)<a class="headerlink" href="#example-of-file-cdl-format" title="Permalink to this headline">¶</a></h2>
+<p>To summarize we have the following NetCDF Raw Lidar Data file (in CDL
+format):</p>
+<div class="highlight-python"><pre>dimensions:
+ points = 5000 ;
+ channels = 4 ;
+ time = UNLIMITED ; // (10 currently)
+ nb_of_time_scales = 2 ;
+ scan_angles = 1 ;
+ time_bck = 6 ;
+variables:
+ int channel_ID(channels) ;
+ int Laser_Repetition_Rate(channels) ;
+ double Laser_Pointing_Angle(scan_angles) ;
+ int ID_Range(channels) ;
+ int Scattering_Mechanism(channels) ;
+ double Emitted_Wavelength(channels) ;
+ double Detected_Wavelength(channels) ;
+ double Raw_Data_Range_Resolution(channels) ;
+ int Background_Mode(channels) ;
+ double Background_Low(channels) ;
+ double Background_High(channels) ;
+ int Molecular_Calc ;
+ double Pressure_at_Lidar_Station ;
+ double Temperature_at_Lidar_Station ;
+ int id_timescale(channels) ;
+ double Dead_Time(channels) ;
+ int Dead_Time_Corr_Type(channels) ;
+ int Acquisition_Mode(channels) ;
+ double Trigger_Delay(channels) ;
+ int LR_Input(channels) ;
+ int Laser_Pointing_Angle_of_Profiles(time, nb_of_time_scales) ;
+ int Raw_Data_Start_Time(time, nb_of_time_scales) ;
+ int Raw_Data_Stop_Time(time, nb_of_time_scales) ;
+ int Raw_Bck_Start_Time(time_bck, nb_of_time_scales) ;
+ int Raw_Bck_Stop_Time(time_bck, nb_of_time_scales) ;
+ int Laser_Shots(time, channels) ;
+ double Raw_Lidar_Data(time, channels, points) ;
+ double Background_Profile(time_bck, channels, points) ;
+ double DAQ_Range(channels) ;
+
+// global attributes:
+ :Measurement_ID = "20090130cc00" ;
+ :RawData_Start_Date = "20090130" ;
+ :RawData_Start_Time_UT = "000001" ;
+ :RawData_Stop_Time_UT = "000501" ;
+ :RawBck_Start_Date = "20090129" ;
+ :RawBck_Start_Time_UT = "235001" ;
+ :RawBck_Stop_Time_UT = "235301" ;
+
+data:
+
+ channel_ID = 7, 5, 6, 8 ;
+
+ Laser_Repetition_Rate = 50, 50, 50, 50 ;
+
+ Laser_Pointing_Angle = 5 ;
+
+ ID_Range = 1, 1, 1, 1 ;
+
+ Scattering_Mechanism = 0, 2, 3, 1 ;
+
+ Emitted_Wavelength = 1064, 532, 532, 532 ;
+
+ Detected_Wavelength = 1064, 532, 532, 607 ;
+
+ Raw_Data_Range_Resolution = 7.5, 15, 15, 15 ;
+
+ Background_Mode = 0, 1, 1, 1 ;
+
+ Background_Low = 0, 30000, 30000, 30000 ;
+
+ Background_High = 500, 50000, 50000, 50000 ;
+
+ Molecular_Calc = 0 ;
+
+ Pressure_at_Lidar_Station = 1010 ;
+
+ Temperature_at_Lidar_Station = 19.8 ;
+
+ id_timescale = 1, 0, 0, 0 ;
+
+ Dead_Time = _, 10, 10, 10 ;
+
+ Dead_Time_Corr_Type = _, 0, 0, 0 ;
+
+ Acquisition_Mode = 0, 1, 1, 1 ;
+
+ Trigger_Delay = 50, 0, 0, 0 ;
+
+ LR_Input = 1,_,_,_ ;
+
+ DAQ_Range = 100,_,_,_ ;
+
+ Laser_Pointing_Angle_of_Profiles =
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ _, 0,
+ _, 0,
+ _, 0,
+ _, 0,
+ _, 0 ;
+
+
+ Raw_Data_Start_Time =
+ 0, 0,
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ 240, 120,
+ _, 150,
+ _, 180,
+ _, 210,
+ _, 240,
+ _, 270 ;
+
+ Raw_Data_Stop_Time =
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ 240, 120,
+ 300, 150,
+ _, 180,
+ _, 210,
+ _, 240,
+ _, 270,
+ _, 300 ;
+
+
+ Raw_Bck_Start_Time =
+ 0, 0,
+ 60, 30,
+ 120, 60,
+ _, 90,
+ _, 120,
+ _, 150;
+
+
+Raw_Bck_Stop_Time =
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ _, 120,
+ _, 150,
+ _, 180 ;
+
+
+ Laser_Shots =
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _ ;
+
+
+ Raw_Lidar_Data = ...
+
+ Background_Profile = ...</pre>
+</div>
+<p>Please keep in mind that in case you submit a file like the previous one
+all the parameters present in it will be used by the SCC even if you
+have different values for the same parameters within the SCC_DB. If you
+want to use the values already stored in SCC_DB (this should be the
+usual way to use SCC) the Raw Lidar Data input file has to be
+modified as follows:</p>
+<div class="highlight-python"><pre>dimensions:
+ points = 5000 ;
+ channels = 4 ;
+ time = UNLIMITED ; // (10 currently)
+ nb_of_time_scales = 2 ;
+ scan_angles = 1 ;
+ time_bck = 6 ;
+variables:
+ int channel_ID(channels) ;
+ double Laser_Pointing_Angle(scan_angles) ;
+ double Background_Low(channels) ;
+ double Background_High(channels) ;
+ int Molecular_Calc ;
+ double Pressure_at_Lidar_Station ;
+ double Temperature_at_Lidar_Station ;
+ int id_timescale(channels) ;
+ int Laser_Pointing_Angle_of_Profiles(time, nb_of_time_scales) ;
+ int Raw_Data_Start_Time(time, nb_of_time_scales) ;
+ int Raw_Data_Stop_Time(time, nb_of_time_scales) ;
+ int Raw_Bck_Start_Time(time_bck, nb_of_time_scales) ;
+ int Raw_Bck_Stop_Time(time_bck, nb_of_time_scales) ;
+ int LR_Input(channels) ;
+ int Laser_Shots(time, channels) ;
+ double Raw_Lidar_Data(time, channels, points) ;
+ double Background_Profile(time_bck, channels, points) ;
+ double DAQ_Range(channels) ;
+
+// global attributes:
+ :Measurement_ID = "20090130cc00" ;
+ :RawData_Start_Date = "20090130" ;
+ :RawData_Start_Time_UT = "000001" ;
+ :RawData_Stop_Time_UT = "000501" ;
+ :RawBck_Start_Date = "20090129" ;
+ :RawBck_Start_Time_UT = "235001" ;
+ :RawBck_Stop_Time_UT = "235301" ;
+
+data:
+
+ channel_ID = 7, 5, 6, 8 ;
+
+ Laser_Pointing_Angle = 5 ;
+
+ Background_Low = 0, 30000, 30000, 30000 ;
+
+ Background_High = 500, 50000, 50000, 50000 ;
+
+ Molecular_Calc = 0 ;
+
+ Pressure_at_Lidar_Station = 1010 ;
+
+ Temperature_at_Lidar_Station = 19.8 ;
+
+ id_timescale = 1, 0, 0, 0 ;
+
+ LR_Input = 1,_,_,_ ;
+
+ DAQ_Range = 100,_,_,_ ;
+
+ Laser_Pointing_Angle_of_Profiles =
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ 0, 0,
+ _, 0,
+ _, 0,
+ _, 0,
+ _, 0,
+ _, 0 ;
+
+
+ Raw_Data_Start_Time =
+ 0, 0,
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ 240, 120,
+ _, 150,
+ _, 180,
+ _, 210,
+ _, 240,
+ _, 270 ;
+
+ Raw_Data_Stop_Time =
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ 240, 120,
+ 300, 150,
+ _, 180,
+ _, 210,
+ _, 240,
+ _, 270,
+ _, 300 ;
+
+
+ Raw_Bck_Start_Time =
+ 0, 0,
+ 60, 30,
+ 120, 60,
+ _, 90,
+ _, 120,
+ _, 150;
+
+
+ Raw_Bck_Stop_Time =
+ 60, 30,
+ 120, 60,
+ 180, 90,
+ _, 120,
+ _, 150,
+ _, 180 ;
+
+
+ Laser_Shots =
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, 3000, 3000, 3000,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _,
+ 1500, _, _, _ ;
+
+
+ Raw_Lidar_Data = ...
+
+ Background_Profile = ...</pre>
+</div>
+<p>This example file contains the minimum collection of mandatory
+information that has to be found within the Raw Lidar Data input
+file. If it is really necessary, the user can decide to add to these
+mandatory parameters any number of additional parameters considered in
+the previous example.</p>
+<p>Finally, suppose we want to make the following changes with respect to
+the previous example:</p>
+<ol class="arabic simple">
+<li>use a sounding file for molecular density calculation instead of “US
+Standar Atmosphere 1976”</li>
+<li>supply a lidar ratio profile to use in elastic backscatter retrieval
+instead of a fixed value</li>
+<li>provide a overlap function for overlap correction</li>
+</ol>
+<p>In this case we have to generate the following NetCDF additional files:</p>
+<dl class="docutils">
+<dt>rs_20090130cc00.nc</dt>
+<dd>The name of Sounding Data file has to be computed as follows:
+<tt class="docutils literal"><span class="pre">"rs_"``+``Measurement_ID</span></tt>
+The structure of this file is summarized in table tab:sounding.</dd>
+<dt>ov_20090130cc00.nc</dt>
+<dd>The name of Overlap file has to be computed as follows:
+<tt class="docutils literal"><span class="pre">"ov_"``+``Measurement_ID</span></tt>
+The structure of this file is summarized in table tab:overlap.</dd>
+<dt>lr_20090130cc00.nc</dt>
+<dd>The name of Lidar Ratio file has to be computed as follows:
+<tt class="docutils literal"><span class="pre">"lr_"``+``Measurement_ID</span></tt>
+The structure of this file is summarized in table tab:lr.</dd>
+</dl>
+<p>Moreover we need to apply the following changes to the Raw Lidar Data
+input file:</p>
+<ol class="arabic">
+<li><p class="first">Change the value of the variable <tt class="docutils literal"><span class="pre">Molecular_Calc</span></tt> as follows:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">Molecular_Calc</span> <span class="o">=</span> <span class="mi">1</span> <span class="p">;</span>
+</pre></div>
+</div>
+<p>Of course the variables <tt class="docutils literal"><span class="pre">Pressure_at_Lidar_Station</span></tt> and
+<tt class="docutils literal"><span class="pre">Temperature_at_Lidar_Station</span></tt> are not necessary anymore.</p>
+</li>
+<li><p class="first">Change the values of the array <tt class="docutils literal"><span class="pre">LR_Input</span></tt> as follows:</p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">LR_Input</span> <span class="o">=</span> <span class="mi">0</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span><span class="p">,</span><span class="n">_</span> <span class="p">;</span>
+</pre></div>
+</div>
+</li>
+<li><p class="first">Add the global attribute <tt class="docutils literal"><span class="pre">Sounding_File_Name</span></tt></p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">Sounding_File_Name</span> <span class="o">=</span> <span class="s">"rs_20090130cc00.nc"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</li>
+</ol>
+<ol class="arabic" start="5">
+<li><p class="first">Add the global attribute <tt class="docutils literal"><span class="pre">LR_File_Name</span></tt></p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">LR_File_Name</span> <span class="o">=</span> <span class="s">"lr_20090130cc00.nc"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</li>
+<li><p class="first">Add the global attribute <tt class="docutils literal"><span class="pre">Overlap_File_Name</span></tt></p>
+<div class="highlight-python"><div class="highlight"><pre><span class="n">Overlap_File_Name</span> <span class="o">=</span> <span class="s">"ov_20090130cc00.nc"</span> <span class="p">;</span>
+</pre></div>
+</div>
+</li>
+</ol>
+</div>
+</div>
+
+
+ </div>
+ </div>
+ </div>
+ <div class="sphinxsidebar">
+ <div class="sphinxsidebarwrapper">
+ <h3><a href="index.html">Table Of Contents</a></h3>
+ <ul>
+<li><a class="reference internal" href="#">The SCC netCDF file format</a><ul>
+<li><a class="reference internal" href="#rationale">Rationale</a></li>
+<li><a class="reference internal" href="#example">Example</a><ul>
+<li><a class="reference internal" href="#dimensions">Dimensions</a></li>
+<li><a class="reference internal" href="#variables">Variables</a></li>
+<li><a class="reference internal" href="#global-attributes">Global attributes</a></li>
+</ul>
+</li>
+<li><a class="reference internal" href="#example-of-file-cdl-format">Example of file (CDL format)</a></li>
+</ul>
+</li>
+</ul>
+
+ <h4>Previous topic</h4>
+ <p class="topless"><a href="measurement_upload.html"
+ title="previous chapter">Processing measurement</a></p>
+ <h4>Next topic</h4>
+ <p class="topless"><a href="user_managment.html"
+ title="next chapter">User management</a></p>
+ <h3>This Page</h3>
+ <ul class="this-page-menu">
+ <li><a href="_sources/netcdf_file.txt"
+ rel="nofollow">Show Source</a></li>
+ </ul>
+<div id="searchbox" style="display: none">
+ <h3>Quick search</h3>
+ <form class="search" action="search.html" method="get">
+ <input type="text" name="q" />
+ <input type="submit" value="Go" />
+ <input type="hidden" name="check_keywords" value="yes" />
+ <input type="hidden" name="area" value="default" />
+ </form>
+ <p class="searchtip" style="font-size: 90%">
+ Enter search terms or a module, class or function name.
+ </p>
+</div>
+<script type="text/javascript">$('#searchbox').show(0);</script>
+ </div>
+ </div>
+ <div class="clearer"></div>
+ </div>
+ <div class="related">
+ <h3>Navigation</h3>
+ <ul>
+ <li class="right" style="margin-right: 10px">
+ <a href="genindex.html" title="General Index"
+ >index</a></li>
+ <li class="right" >
+ <a href="user_managment.html" title="User management"
+ >next</a> |</li>
+ <li class="right" >
+ <a href="measurement_upload.html" title="Processing measurement"
+ >previous</a> |</li>
+ <li><a href="index.html">Single Calculus Chain 0.2 documentation</a> »</li>
+ </ul>
+ </div>
+ <div class="footer">
+ © Copyright 2012, SCC team.
+ Created using <a href="http://sphinx.pocoo.org/">Sphinx</a> 1.1.2.
+ </div>
+ </body>
+</html>
\ No newline at end of file
