Mercurial > public > sccdocs / changeset

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/.hgignore	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,4 @@
+syntax: glob
+*.*~
+re:^_
+re:~$

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/conf.py~	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,289 @@
+# -*- coding: utf-8 -*-
+#
+# Single Calculus Chain documentation build configuration file, created by
+# sphinx-quickstart on Thu Mar 15 10:35:01 2012.
+#
+# This file is execfile()d with the current directory set to its containing dir.
+#
+# Note that not all possible configuration values are present in this
+# autogenerated file.
+#
+# All configuration values have a default; values that are commented out
+# serve to show the default.
+
+import sys, os
+
+# If extensions (or modules to document with autodoc) are in another directory,
+# add these directories to sys.path here. If the directory is relative to the
+# documentation root, use os.path.abspath to make it absolute, like shown here.
+#sys.path.insert(0, os.path.abspath('.'))
+
+# -- General configuration -----------------------------------------------------
+
+# If your documentation needs a minimal Sphinx version, state it here.
+#needs_sphinx = '1.0'
+
+# Add any Sphinx extension module names here, as strings. They can be extensions
+# coming with Sphinx (named 'sphinx.ext.*') or your custom ones.
+extensions = ['sphinx.ext.autodoc', 'sphinx.ext.intersphinx', 'sphinx.ext.todo', 'sphinx.ext.mathjax']
+
+# Add any paths that contain templates here, relative to this directory.
+templates_path = ['aux_templates']
+
+# The suffix of source filenames.
+source_suffix = '.rst'
+
+# The encoding of source files.
+#source_encoding = 'utf-8-sig'
+
+# The master toctree document.
+master_doc = 'index'
+
+# General information about the project.
+project = u'Single Calculus Chain'
+copyright = u'2012, SCC team'
+
+# The version info for the project you're documenting, acts as replacement for
+# |version| and |release|, also used in various other places throughout the
+# built documents.
+#
+# The short X.Y version.
+version = '2'
+# The full version, including alpha/beta/rc tags.
+release = '2'
+
+# The language for content autogenerated by Sphinx. Refer to documentation
+# for a list of supported languages.
+#language = None
+
+# There are two options for replacing |today|: either, you set today to some
+# non-false value, then it is used:
+#today = ''
+# Else, today_fmt is used as the format for a strftime call.
+#today_fmt = '%B %d, %Y'
+
+# List of patterns, relative to source directory, that match files and
+# directories to ignore when looking for source files.
+exclude_patterns = ['aux_build']
+
+# The reST default role (used for this markup: `text`) to use for all documents.
+#default_role = None
+
+# If true, '()' will be appended to :func: etc. cross-reference text.
+#add_function_parentheses = True
+
+# If true, the current module name will be prepended to all description
+# unit titles (such as .. function::).
+#add_module_names = True
+
+# If true, sectionauthor and moduleauthor directives will be shown in the
+# output. They are ignored by default.
+#show_authors = False
+
+# The name of the Pygments (syntax highlighting) style to use.
+pygments_style = 'sphinx'
+
+# A list of ignored prefixes for module index sorting.
+#modindex_common_prefix = []
+
+
+# -- Options for HTML output ---------------------------------------------------
+
+# The theme to use for HTML and HTML Help pages.  See the documentation for
+# a list of builtin themes.
+html_theme = 'nature'
+
+# Theme options are theme-specific and customize the look and feel of a theme
+# further.  For a list of options available for each theme, see the
+# documentation.
+#html_theme_options = {}
+
+# Add any paths that contain custom themes here, relative to this directory.
+#html_theme_path = []
+
+# The name for this set of Sphinx documents.  If None, it defaults to
+# "<project> v<release> documentation".
+#html_title = None
+
+# A shorter title for the navigation bar.  Default is the same as html_title.
+#html_short_title = None
+
+# The name of an image file (relative to this directory) to place at the top
+# of the sidebar.
+#html_logo = None
+
+# The name of an image file (within the static path) to use as favicon of the
+# docs.  This file should be a Windows icon file (.ico) being 16x16 or 32x32
+# pixels large.
+#html_favicon = None
+
+# Add any paths that contain custom static files (such as style sheets) here,
+# relative to this directory. They are copied after the builtin static files,
+# so a file named "default.css" will overwrite the builtin "default.css".
+html_static_path = ['aux_static']
+
+# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
+# using the given strftime format.
+#html_last_updated_fmt = '%b %d, %Y'
+
+# If true, SmartyPants will be used to convert quotes and dashes to
+# typographically correct entities.
+#html_use_smartypants = True
+
+# Custom sidebar templates, maps document names to template names.
+#html_sidebars = {}
+
+# Additional templates that should be rendered to pages, maps page names to
+# template names.
+#html_additional_pages = {}
+
+# If false, no module index is generated.
+#html_domain_indices = True
+
+# If false, no index is generated.
+#html_use_index = True
+
+# If true, the index is split into individual pages for each letter.
+#html_split_index = False
+
+# If true, links to the reST sources are added to the pages.
+#html_show_sourcelink = True
+
+# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
+#html_show_sphinx = True
+
+# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
+#html_show_copyright = True
+
+# If true, an OpenSearch description file will be output, and all pages will
+# contain a <link> tag referring to it.  The value of this option must be the
+# base URL from which the finished HTML is served.
+#html_use_opensearch = ''
+
+# This is the file name suffix for HTML files (e.g. ".xhtml").
+#html_file_suffix = None
+
+# Output file base name for HTML help builder.
+htmlhelp_basename = 'SingleCalculusChaindoc'
+
+
+# -- Options for LaTeX output --------------------------------------------------
+
+latex_elements = {
+# The paper size ('letterpaper' or 'a4paper').
+#'papersize': 'letterpaper',
+
+# The font size ('10pt', '11pt' or '12pt').
+#'pointsize': '10pt',
+
+# Additional stuff for the LaTeX preamble.
+#'preamble': '',
+}
+
+# Grouping the document tree into LaTeX files. List of tuples
+# (source start file, target name, title, author, documentclass [howto/manual]).
+latex_documents = [
+  ('index', 'SingleCalculusChain.tex', u'Single Calculus Chain Documentation',
+   u'SCC team', 'manual'),
+]
+
+# The name of an image file (relative to this directory) to place at the top of
+# the title page.
+#latex_logo = None
+
+# For "manual" documents, if this is true, then toplevel headings are parts,
+# not chapters.
+#latex_use_parts = False
+
+# If true, show page references after internal links.
+#latex_show_pagerefs = False
+
+# If true, show URL addresses after external links.
+#latex_show_urls = False
+
+# Documents to append as an appendix to all manuals.
+#latex_appendices = []
+
+# If false, no module index is generated.
+#latex_domain_indices = True
+
+
+# -- Options for manual page output --------------------------------------------
+
+# One entry per manual page. List of tuples
+# (source start file, name, description, authors, manual section).
+man_pages = [
+    ('index', 'singlecalculuschain', u'Single Calculus Chain Documentation',
+     [u'SCC team'], 1)
+]
+
+# If true, show URL addresses after external links.
+#man_show_urls = False
+
+
+# -- Options for Texinfo output ------------------------------------------------
+
+# Grouping the document tree into Texinfo files. List of tuples
+# (source start file, target name, title, author,
+#  dir menu entry, description, category)
+texinfo_documents = [
+  ('index', 'SingleCalculusChain', u'Single Calculus Chain Documentation',
+   u'SCC team', 'SingleCalculusChain', 'One line description of project.',
+   'Miscellaneous'),
+]
+
+# Documents to append as an appendix to all manuals.
+#texinfo_appendices = []
+
+# If false, no module index is generated.
+#texinfo_domain_indices = True
+
+# How to display URL addresses: 'footnote', 'no', or 'inline'.
+#texinfo_show_urls = 'footnote'
+
+
+# -- Options for Epub output ---------------------------------------------------
+
+# Bibliographic Dublin Core info.
+epub_title = u'Single Calculus Chain'
+epub_author = u'SCC team'
+epub_publisher = u'SCC team'
+epub_copyright = u'2012, SCC team'
+
+# The language of the text. It defaults to the language option
+# or en if the language is not set.
+#epub_language = ''
+
+# The scheme of the identifier. Typical schemes are ISBN or URL.
+#epub_scheme = ''
+
+# The unique identifier of the text. This can be a ISBN number
+# or the project homepage.
+#epub_identifier = ''
+
+# A unique identification for the text.
+#epub_uid = ''
+
+# A tuple containing the cover image and cover page html template filenames.
+#epub_cover = ()
+
+# HTML files that should be inserted before the pages created by sphinx.
+# The format is a list of tuples containing the path and title.
+#epub_pre_files = []
+
+# HTML files shat should be inserted after the pages created by sphinx.
+# The format is a list of tuples containing the path and title.
+#epub_post_files = []
+
+# A list of files that should not be packed into the epub file.
+#epub_exclude_files = []
+
+# The depth of the table of contents in toc.ncx.
+#epub_tocdepth = 3
+
+# Allow duplicate toc entries.
+#epub_tocdup = True
+
+
+# Example configuration for intersphinx: refer to the Python standard library.
+intersphinx_mapping = {'http://docs.python.org/': None}

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/adding_channels.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+Adding channels
+===============

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/adding_otherequipment.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+Adding other equipment
+======================

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/adding_products.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+Adding products
+===============

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/adding_station.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+Adding stations
+===============

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/adding_system.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+Adding systems
+==============

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/handbook_of_instruments.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+The Handbook of instruments
+===========================

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/introduction.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,2 @@
+Introduction
+============

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/uploading_measurements.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,3 @@
+Uploading measuremnents
+=======================
+123

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/details/viewing_measurements.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,4 @@
+View processing results
+=======================
+
+123

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/interface_details.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,24 @@
+.. Single Calculus Chain interface documentation master file, created by
+   sphinx-quickstart on Tue Feb  7 13:17:19 2012.
+   You can adapt this file completely to your liking, but it should at least
+   contain the root `toctree` directive.
+
+Detailed documentation
+======================
+
+Contents:
+
+.. toctree::
+   :maxdepth: 2
+   
+   /details/introduction
+   /details/adding_station
+   /details/adding_system
+   /details/adding_channels
+   /details/adding_products
+   /details/adding_otherequipment
+   /details/handbook_of_instruments
+   /details/uploading_measurements
+   /details/viewing_measurements
+
+

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/output.txt	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,747 @@
+sphinx-build -b latex -d _build/doctrees   . _build/latex
+Running Sphinx v1.1.2
+loading pickled environment... done
+building [latex]: all documents
+updating environment: 0 added, 0 changed, 0 removed
+looking for now-outdated files... none found
+processing SingleCalculusChain.tex... index introduction tutorial tutorial/introduction tutorial/adding_station tutorial/adding_system tutorial/adding_channels tutorial/adding_products tutorial/processing_data interface_details details/introduction details/adding_station details/adding_system details/adding_channels details/adding_products details/adding_otherequipment details/handbook_of_instruments details/uploading_measurements details/viewing_measurements netcdf_file user_management 
+resolving references...
+writing... done
+copying TeX support files... done
+build succeeded.
+Running LaTeX files through pdflatex...
+make -C _build/latex all-pdf
+make[1]: Entering directory `/home/iannis/doc_projects/scc_documentation/_build/latex'
+pdflatex  'SingleCalculusChain.tex'
+This is pdfTeX, Version 3.1415926-1.40.10 (TeX Live 2009/Debian)
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+[23] [24]
+Chapter 5.
+[25] [26]
+Chapter 6.
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+[7] [8]
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+make[1]: Leaving directory `/home/iannis/doc_projects/scc_documentation/_build/latex'
+pdflatex finished; the PDF files are in _build/latex.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,21 @@
+.. Single Calculus Chain interface documentation master file, created by
+   sphinx-quickstart on Tue Feb  7 13:17:19 2012.
+   You can adapt this file completely to your liking, but it should at least
+   contain the root `toctree` directive.
+
+Tutorial
+========
+
+Contents:
+
+.. toctree::
+   :maxdepth: 2
+   
+   tutorial/introduction
+   tutorial/adding_station
+   tutorial/adding_system
+   tutorial/adding_channels
+   tutorial/adding_products
+   tutorial/processing_data
+
+

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial/adding_channels.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,4 @@
+Adding channels
+===============
+
+Walk-through of adding a channel.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial/adding_products.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,4 @@
+Adding products
+===============
+
+Walk-through of adding a product.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial/adding_station.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,65 @@
+Adding stations
+===============
+
+Not every field that is present in the database is used in the in the Single Calculs Chain. 
+Many of them are part of the Handbook of Instruments. 
+
+Hoi stations
+------------
+In the **HOI stations** section you can control the main parameters of the statino you have access to.
+From here you can edit the existing station or add a new one. 
+
+Adding a new station
+~~~~~~~~~~~~~~~~~~~~
+When adding a new station you need to specify the following fields
+
+Name
+   The name of the station 
+
+Id
+   The earlinet call sign with exactrly 2 caracters.
+
+Latitude
+   In degrees north is the latitude of the station.
+   
+Longitude
+   In degrees east is the longitude of the station.
+
+Height asl
+   The altitude of the station in meters above sea level.
+
+PI
+   The name of the Principal Investigator of the station. 
+
+You can add the definition of new systems that belong to the station by clicking on the Hoi System blue line that 
+appears bollow the main station fields. For more details on the filed you need to fill in see the :ref:`add_new_system` section.
+You can add more stations by clicking on the "Add another Hoi System" option.
+
+.. note::
+
+   You need to have *Javascript* enebled to add a new station from this page.
+
+
+
+Updating an existing station
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+Deleting a station
+~~~~~~~~~~~~~~~~~~
+
+System configuration
+--------------------
+
+
+.. _add_new_system:
+
+Adding a new system configuration
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+Updating an existing system 
+~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+Deleting a system
+~~~~~~~~~~~~~~~~~
+
+

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial/adding_system.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,4 @@
+Adding systems
+===============
+
+Walk-through of adding a system.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial/introduction.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,10 @@
+Introduction
+============
+
+* The Single calculus chain is made of different modules. These modules don't interact directly but only change value in a database.
+* This interface will allow Earlinet memebers to interact with parts of the database.
+* One part of the interface (the "Station admin" section) permits registering a new station, registerring new lidar systems and configuration, fill in details for the channels that constitute the system and finnaly define the products (extinction, backscatter e.t.c.) that need to be calculated by the SCC.
+* The second part of the interface is dedicated to the uploading of new measurement files, the configuration of the measurement specific paramters and, finally, the retrieval of the calculated products. 
+* Different types of users, with different level of access permissions can have access in the interface. In this way, higher level of flexibility and security can be achived.
+
+

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tutorial/processing_data.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,4 @@
+Processing data
+===============
+
+Walk-through of how to upload a file and seeing the results.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/user_management.rst	Thu Mar 29 16:31:41 2012 +0200
@@ -0,0 +1,11 @@
+User management
+===============
+Acount types
+------------
+
+Requesting a new account
+------------------------
+
+User account security
+---------------------
+